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tv.qiagenbioinformatics.com

Watch tutorials, interviews and much more on our web based TV channel!

science & medicine

All Episodes

03:49

Explore ATCC's most popular cell lines that contains...

tv.qiagenbioinformatics.com ·

2024/08/13

Explore a growing database of human and mouse cell line ‘omics data from common and novel cell lines, primary tissues and cells from ATCC. Speed up cell line characterization for your preclinical experiments with quality cell line ‘omics data.

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04:11

Explore Hand curated ‘omics data from ATCC's most...

tv.qiagenbioinformatics.com ·

2024/08/13

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02:49

Explore expression data from ATCC Cell line lands...

tv.qiagenbioinformatics.com ·

2024/08/13

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02:01:40

QIAGEN Ingenuity Pathway Analysis (IPA) new user...

tv.qiagenbioinformatics.com ·

2024/08/12

Are you new to QIAGEN IPA or interested in expanding your skill set? Join us as we learn more on large dataset analysis and knowledge base queries using QIAGEN IPA. You’ll learn how to: • Upload multiple dataset types (e.g., RNA-seq, proteomics, metabolomics) and perform interactive core/pathway analysis in IPA • Learn how to interpret different results, including pathways, key regulators, impact on biological functions/diseases and more • Compare different experimental conditions (e.g., single-cell

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55:36

Discovery from sample-level public data (GEO, SRA and...

tv.qiagenbioinformatics.com ·

2024/08/05

Within QIAGEN Ingenuity Pathway Analysis (IPA), public data sourced from OmicSoft is already processed and standardized, making it easy to jump to the actual research.In this training, we'll show how to effectively use sample-level public data and metadata from sources like GEO, SRA, TCGA, GTEx, Blueprint, CCLE and other sources using the IPA Analysis Match and Land Explorer features. We will walk through various use cases, such as biomarker discovery, drug target investigation, studying survival

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01:19:53

Probing OncoLand using OmicSoft Studio

tv.qiagenbioinformatics.com ·

2024/08/01

There's more than one way to probe our OncoLand data. With the OmicSoft Studio graphical user interface (GUI), you won't need a script to fetch the data you want.This training will show how high-quality curated genomic repositories, such as the QIAGEN OmicSoft Lands, immediately allow in-depth investigations across diverse oncology and normal tissues/cells data sources (GEO, CPTAC, TCGA, GTEx and many more) to discover and validate candidate checkpoint inhibitor drug targets and biomarker

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46:18

Checkpoint inhibitor and immuno-oncology...

tv.qiagenbioinformatics.com ·

2024/07/25

While there is great interest in the scientific community to investigate drug targets and biomarkers from public immune-oncology data, such investigation is hindered by the difficulty in finding and combining related datasets to perform large-scale meta-analyses. This webinar will focus on how high quality curated genomic repositories such as the QIAGEN OmicSoft Lands database immediately allows in-depth investigations across diverse data-sources (GEO, CPTAC, TCGA, GTEx and many more) to discover

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01:31:41

IPA deeper dive: Making most out of user’s...

tv.qiagenbioinformatics.com ·

2024/07/24

An Ingenuity Pathway Analysis (IPA) deeper dive into the core analysis (also known as expression analysis) training was requested by IPA users. Core/Expression analysis is performed on RNA-seq, scRNA-seq, proteomics and many other types of ‘omics data). Accordingly, this training will focus on these topics and more:· What are the different result types of results produced by an IPA core analysis? · How can we identify key regulators and relevant regulatory networks? · What are the biomarkers and

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01:00:04

Assessing drug safety with QIAGEN Biomedical KB-AI

tv.qiagenbioinformatics.com ·

2024/07/24

Are you a healthcare professional, clinical researcher or data scientist interested in drug safety research? If so, you know how vital understanding a drug’s adverse effects is to maximize its effect while minimizing its risks. This webinar will show how the QIAGEN Biomedical KB-AI knowledge graph can be used to explore scientific and pharmacovigilance data. Focusing on immune checkpoint inhibitors (ICIs), we will also demonstrate how Neo4j and Python can be combined to query, visualize and analyze

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01:19:22

Antimicrobial resistance (AMR) and multi-locus...

tv.qiagenbioinformatics.com ·

2024/07/22

You asked, and we’re here to deliver. In this training, we’ll cover how antimicrobial resistance (AMR) is used for isolation or can be easily integrated with other functionalities such as multi-locus sequence typing (MLST). In this training, we’ll cover: • Introduction to AMR, MLST and relevant databases • QIAGEN Microbial Insight - Antimicrobial Resistance database (QMI-AR) • Importing data and downloading needed databases • Finding resistance with nucleotide DB, PointFinder and ShortBRED •

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02:21

OmicSoft API : Flexible API access for complex...

tv.qiagenbioinformatics.com ·

2024/07/19

API access to QIAGEN OmicSoft data, you’ll be empowered to get right to the data analysis with queries of small or huge data slices from our unified ‘omics database. QIAGEN's rigorous metadata curation approach combined with API access to structured and integrated ‘omics data allows you to perform large and complex cross-database, multi-omics queries.

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01:20:27

De novo assembly, BLAST and genome finishing with...

tv.qiagenbioinformatics.com ·

2024/07/18

This webinar will introduce users to the tools available for short reads (Illumina) as well as long reads (Oxford Nanopore, Pac Bio) de novo assembly in CLC Genomics Workbench. It will also go over other useful functionalities such as BLAST and genome finishing.Participants will learn the following: o Download and install needed plugins. o Import data required for the analysis. o Run the de novo assembly workflow. o For long reads, improve a de novo assembly by polishing with short, high-quality

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01:01:57

Benefits of integrating targeted next-generation...

tv.qiagenbioinformatics.com ·

2024/07/18

Variant detection of multiple genes from a single tumor sample requires high-throughput molecular testing. To meet this demand, targeted next-generation sequencing (NGS) panels are useful in clinical settings for accurate tumor profiling and the identification of essential molecular aberrations for personalized therapies. By focusing only on a subset of genes, targeted NGS is not only a cost-effective solution, but can rapidly deliver insights into a tumor molecular profile. To address this

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01:22:46

Discoveries from comparing user data with...

tv.qiagenbioinformatics.com ·

2024/07/18

Discoveries from comparing user data with high-quality public genomics data Description: Scientists across biopharma and academia, from early discovery and translational research to toxicology and more, are highly interested in comparing and validating their 'omics experiment results such as RNA-seq, microarray, and single cell RNA-seq against published datasets. With QIAGEN OmicSoft Lands collections of deeply curated omics datasets from biomarkers and drug target investigations, tissue and cell

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01:03

Sample to Insight Oncology

tv.qiagenbioinformatics.com ·

2024/07/18

Sample to insight solution for any oncology applocation

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52:12

Investigate biomarkers, drug targets and more with...

tv.qiagenbioinformatics.com ·

2024/07/17

QIAGEN IPA's BioProfiler feature allows you to explore and filter the details behind the connections of molecules to diseases and biological functions. You'll learn to use BioProfiler to: · Make novel discoveries with the ability to filter the fine-grained relationships between molecules (genes, RNAs, proteins and chemicals) and diseases or functions · Identify how specific genes are causally linked to user’s disease(s) of interest · Investigate different types of biomarkers · Investigate drugs in

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01:08:30

QIAGEN Ingenuity Pathway Analysis (IPA) summer camp...

tv.qiagenbioinformatics.com ·

2024/07/17

• Compare different experimental conditions (different ‘omics data, treatments, time points, single-cell clusters, disease types and more) and identify similarities and contrasts • Generate a network even without a dataset or experimental design for hypothesis generation

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01:09:53

QIAGEN Ingenuity Pathway Analysis (IPA) summer camp...

tv.qiagenbioinformatics.com ·

2024/07/17

• Understand the different result types produced (pathways, key regulators, and more) • Customize chart outputs using filters and different chart types like a volcano plot like bubble chart

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01:08:26

QIAGEN Ingenuity Pathway Analysis (IPA) summer camp...

tv.qiagenbioinformatics.com ·

2024/07/17

• IPA general overview • Upload your dataset (RNA-seq, scRNA-seq, proteomics, metabolomics and more) • Set up core/pathway analysis in IPA

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59:59

Leveraging the QIAGEN Knowledge Graph and causal...

tv.qiagenbioinformatics.com ·

2024/07/09

By connecting diverse entities and relationships, biomedical knowledge graphs hold the potential to uncover new insights from existing data. This webinar introduces a machine learning-based approach that utilizes causal interactions from the QIAGEN Knowledge Graph to predict novel drug-disease relationships and construct networks that capture relevant supporting evidence. We will present examples that showcase the application of this approach in the context of drug repurposing

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