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tv.qiagenbioinformatics.com

Watch tutorials, interviews and much more on our web based TV channel!

science & medicine

All Episodes

59:59

Leveraging the QIAGEN Knowledge Graph and causal...

tv.qiagenbioinformatics.com ·

2024/07/09

By connecting diverse entities and relationships, biomedical knowledge graphs hold the potential to uncover new insights from existing data. This webinar introduces a machine learning-based approach that utilizes causal interactions from the QIAGEN Knowledge Graph to predict novel drug-disease relationships and construct networks that capture relevant supporting evidence. We will present examples that showcase the application of this approach in the context of drug repurposing

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29:45

Accelerating drug discovery with comprehensive...

tv.qiagenbioinformatics.com ·

2024/07/03

From our talk at BioIT, join QIAGEN Senior Field Application Scientist, Kyle Nilson, PhD, to see how detailed curated knowledge of molecular relationships, datasets and more can quickly drive your understanding of diseases and drive your data-driven drug discovery efforts.

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59:12

HGMD Pro in action: Search, curate and classify...

tv.qiagenbioinformatics.com ·

2024/06/21

As the use of next-generation sequencing (NGS) in diagnostics increases, so does the demand for analysis methods that can speed up turnaround time while ensuring the quality of variant analysis. Since information on a variant plays a critical role in determining its influence on a patient’s diagnosis and treatment, clinicians require a high-quality, trusted knowledge base to lessen manual review and focus on patient care instead.In this previously aired live, interactive training session, our

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32:39

How decentralized and small labs can adopt...

tv.qiagenbioinformatics.com ·

2024/06/14

Next-generation sequencing (NGS) has rapidly gained popularity as a diagnostic testing approach due to its unparalleled ability to comprehensively analyze genetic information with high throughput and precision. However, decentralized and small labs face significant hurdles when it comes to adopting NGS testing. From high upfront costs associated with acquiring the necessary equipment, to the complexity of bioinformatics tools and compliance management that require specialized expertise in data

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57:13

Gene set enrichment, target validation and...

tv.qiagenbioinformatics.com ·

2024/06/12

Learn how to take advantage of QIAGEN Biomedical KB-HD, the high-quality, expert-curated biomedical knowledge base that powers QIAGEN Ingenuity Pathway Analysis. We’ll also show you how to use QIAGEN OmicSoft Lands, our curated, unified multi-omics knowledge base, for gene set enrichment, target validation and data mining.You'll learn how to use simple Python-based workflows for: • Gene Set Enrichment Analysis (GSEA) • Comparing multiple gene set enrichment methods • Validating targets at the cell,

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57:44

Venn diagram and merging datasets using QIAGEN...

tv.qiagenbioinformatics.com ·

2024/06/12

Based on recent feedback, we are hosting this 60min training focused on below 3 topics. • How to increase memory in IPA for better loading of charts and networks (request from new users) • How to generate Venn Diagram (request from new and experienced users) • How to merge multiple dataset files into a single file

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01:00:23

Expert panel: Mitigating variability in somatic...

tv.qiagenbioinformatics.com ·

2024/06/06

Next-generation sequencing (NGS) oncology panels are becoming integral in hospital and academic settings to guide patient treatment and enrollment in clinical trials. But as NGS is increasingly used in precision oncology and an unprecedented amount of genomic information is uncovered, there is an industry-wide issue of standardization: a high degree of variability in variant interpretation currently exists across laboratories.Inconsistencies in variant interpretation among laboratories can create

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52:16

HGMD Pro in action: Search, curate and classify...

tv.qiagenbioinformatics.com ·

2024/06/06

As the use of next-generation sequencing (NGS) in diagnostics increases, so does the demand for analysis methods that can speed up turnaround time while ensuring the quality of variant analysis. Since information on a variant plays a critical role in determining its influence on a patient’s diagnosis and treatment, clinicians require a high-quality, trusted knowledge base to lessen manual review and focus on patient care instead. In this previously aired live, interactive training session, our

en-us

04:57

Plugins Installation for CLC Workbench

tv.qiagenbioinformatics.com ·

2024/06/04

Description: Plugins extend the functionality of CLC Workbenches and CLC Genomics Server. How to install plugins in a CLC Workbench is highlighted in this video. A list of the available plugins is available from the following webpage: https://digitalinsights.qiagen.com/products-overview/plugins/

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22:14

IPA UGM FALL 2020 - Alcohol Modulation of Amyloid...

tv.qiagenbioinformatics.com ·

2024/06/04

In this video, Dr. Sulie Chang from Seton Hall University talks about how they used QIAGEN Ingenuity Pathway Analysis tool to reveal alcohol-mediated systemic inflammations leading to neuroinflammation and neurodegenerative diseases including Alzheimer's disease.

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55:21

Compare and contextualize results using Ingenuity...

tv.qiagenbioinformatics.com ·

2024/05/30

Take your IPA analysis results to the next level by comparing them to your own analyses (different timepoints, treatments, cell lines, diseased and more) or from a library of over 160,000 pre-computed datasets to find similar or opposite biological signatures. Identify key genes or entities and then explore how they are expressed across normal tissues, diseases and more from over 600,000 biological samples to gain deep context.Attendees will learn how to: • Use and interpret the IPA Activity Plot

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01:28:19

Discovery from public data (GEO, SRA and more) using...

tv.qiagenbioinformatics.com ·

2024/05/28

Per public demand, we are hosting a comprehensive training on how to effectively use sample-level public data and metadata from sources like GEO, SRA, TCGA, GTEx, Blueprint, CCLE and other sources through Ingenuity Pathway Analysis (IPA) and IPA Analysis Match Explorer feature. The trainer will walk through use cases in biomarker discovery, drug–target investigation, studying survival in custom patient cohorts, multi-gene correlation and more. Note: The word “condition” below refers to different

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57:10

Streamline H5N1 and other microbial samples with CLC...

tv.qiagenbioinformatics.com ·

2024/05/23

In this training, you will learn how to analyze viral samples using QIAGEN CLC Genomics Workbench. This webinar will focus on bioinformatics workflows and data interpretation using H5N1 as an example, but similar analysis can be done with other viral and microbial (bacteria, fungus and more) samples. Using viral samples, you will learn how to: • Utilize molecular biology tools such as primer design, cloning, alignment and tree construction and Sanger sequencing analysis • Profile the virus present

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01:05:43

Scale up NGS bioinformatics analysis throughput with...

tv.qiagenbioinformatics.com ·

2024/05/23

More and more biopharma and academic groups are looking to process a large number of samples simultaneously or for a quicker turnaround time. This webinar will introduce a flexible and powerful setup for running your NGS sequence analyses through servers or Amazon Web Services (AWS), depending on user preference. We will demonstrate how CLC Genomics Workbench can be used to customize workflows and send analyses for batch execution. We will also highlight analysis automation solutions, use of

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01:31:50

Clinician’s Roundtable: Interpreting genomic test...

tv.qiagenbioinformatics.com ·

2024/05/21

You’re invited to attend the 2024 Clinician’s Roundtable, a virtual event where medical directors and oncologists will discuss how to better interpret genomic test results to tailor treatment strategies for cancer patients. As the role of the Molecular Tumor Board (MTB) becomes increasingly important in the implementation of evidence-based precision cancer medicine programs, molecular pathology labs must overcome challenges in genomic test interpretation to ensure maximum clinical utility of

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58:58

Leveraging the power of API-based omics (RNA-seq,...

tv.qiagenbioinformatics.com ·

2024/05/16

There is a strong interest in the scientific community to use public (GEO, SRA, TCGA, LINCS, etc.) omics (RNA-seq, scRNA-seq, microarray, proteomics, etc.) data for a variety of discoveries. This webinar, aimed at data scientists, bioinformaticians and similar roles in biopharma and academia, explores a comprehensive way of accessing and analyzing high-quality, expertly curated omics data via the QIAGEN OmicSoft APIs. These OmicSoft APIs provide a powerful and flexible platform for discovering,

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53:18

QIAGEN Biomedical KB-HD: data- and analytics-driven...

tv.qiagenbioinformatics.com ·

2024/05/14

Ingenuity Pathway Analysis (IPA), currently cited in tens of thousands of publications and used by a large number of biopharmaceutical companies, is backed by QIAGEN Biomedical KB-HD. Accordingly, biomedical relationships knowledge has practically become required for innovative data- and analytics-driven drug discovery. It powers biomedical knowledge graph analysis, artificial intelligence (AI)-driven target identification and many more applications.In this webinar, we will introduce Biomedical

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01:37:07

DNA-seq analyses (whole genome, whole exome, panel)...

tv.qiagenbioinformatics.com ·

2024/05/02

In this training, we’ll go over how to easily perform DNA-seq analyses (for whole genome, whole exome, panel and similar) easily and effectively using QIAGEN CLC Genomics Workbench.Together, we’ll explore: • Read mapping • Variant calling (SNPs, mutations, Indels and more) • Annotations and filters • Genome Browser

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01:34:24

IPA deep dive: miRNA investigation using QIAGEN...

tv.qiagenbioinformatics.com ·

2024/05/02

In this 90-minute training session, you will learn how to identify target mRNAs for your miRNAs of interest and associate them with pathways, diseases, biological functions, tissues and cell types. Topics that will be covered include: • How to analyze miRNA-seq datasets alone or both miRNA and corresponding mRNA datasets together • How to use QIAGEN IPA without a dataset, using miRNA IDs • Introduction to databases and curated content specific to miRNA • How to effectively apply various filters and

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01:01:21

Germline and Somatic Variant Investigation using...

tv.qiagenbioinformatics.com ·

2024/05/02

The accurate identification and annotation of germline and somatic variants rely on the accuracy and depth of reference databases containing information about the genetic variants, any associated phenotype and their clinical implications. By combining COSMIC, HGMD and QIAGEN QCI IT, scientists can annotate gene variants using the world’s most comprehensive and up-to-date curated scientific evidence and find biological connections in gene variants with manually curated scientific findings. The

en-us

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