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tv.qiagenbioinformatics.com

Watch tutorials, interviews and much more on our web based TV channel!

science & medicine

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01:31:39

Multi-omics (metabolomics, proteomics,...

tv.qiagenbioinformatics.com ·

2023/10/25

This 90-minute training session is about how QIAGEN Ingenuity Pathway Analysis (IPA) allows visualization of molecular intricacy and variations at multiple levels such as transcriptome, proteome, and metabolome. Through a series of brief technical vignettes, it is demonstrated how to: · Generate associations among molecular signatures obtained via integrating multi-omics data · Extract mechanisms from multi-omics data for precision medicine · Disease stratification based on multi-omics profiles ·

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43:23

Circulating Tumor Cell Detection and Analysis to...

tv.qiagenbioinformatics.com ·

2023/10/25

Circulating tumor cells (CTCs) are cells that leave the primary tumor and are intravasated into the blood circulation system. A subset of those make it to other organs and are responsible for metastasis. iCellate’s CellMate platform is a CTC-based liquid biopsy for cancer cell enrichment, detection, and biomarker analysis via a simple blood draw. In this seminar, you’ll learn: From Helena Silva Cascales, senior scientist at iCellate Medical AB, how the isolation of whole-tumor cells provides a more

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55:46

A breakthrough for rare disease: Completing the...

tv.qiagenbioinformatics.com ·

2023/10/25

In its latest release, QCI Interpret for Hereditary extends its market-leading content with further advancements in Artificial Intelligence (AI) for enhanced capabilities in clinical exome NGS testing. Now, with the addition of AI-derived literature references for rare disease genes, QCI Interpret provides complete exome coverage, on top of the existing unrivalled manually curated content and bibliography. In this webinar, we will demonstrate how QCI Interpret is expanding its literature coverage

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01:00:48

Real-World Applications of Clinical Metagenomic...

tv.qiagenbioinformatics.com ·

2023/10/25

Clinical metagenomic next-generation sequencing (mNGS), the comprehensive analysis of microbial and host DNA and RNA in samples from patients, is rapidly moving from research to clinical laboratories. This emerging approach is changing the diagnosis and treatment of diseases, with applications in a range of areas, including oncology, human host gene expression (transcriptomics), and antimicrobial infections and resistance. In this webinar, Elif Dagdan, the director of the Center for Medical Genetics

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01:58:35

Closing the Gap in Clinical Exome Completeness - Part...

tv.qiagenbioinformatics.com ·

2023/10/20

Clinical exome sequencing (CES) is increasingly being adopted by small and mid-sized laboratories to diagnose genetic diseases, aid treatment decisions, and provide prognostic information. However, the exponential increase in genetic data generated from exome and genome panels poses significant workflow challenges. The ability to prioritize potentially pathogenic variants from large datasets and identify the few candidate variants becomes more difficult. This issue is further amplified in cases

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01:34:02

Closing the Gap in Clinical Exome Completeness - Part...

tv.qiagenbioinformatics.com ·

2023/10/20

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04:20

Downloading Reference Genomes in CLC Genomics Workbench

tv.qiagenbioinformatics.com ·

2023/10/18

Find and download commonly used reference data sets provided by QIAGEN and other public resources into CLC Genomics Workbench by using the Reference Data Manager.

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03:39

Creation of Hybrid Reference Data in CLC Genomics...

tv.qiagenbioinformatics.com ·

2023/10/18

In cases where more than one organism is sequenced within one sample, a reference containing all the organisms may be needed. This video will walk you through the steps of creating a hybrid reference dataset.

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05:53

Setup of Custom Reference Data in CLC Genomics Workbench

tv.qiagenbioinformatics.com ·

2023/10/18

Generate and manage individual custom Reference Data Sets with the Reference Data Manager to simplify the configuration of your workflows with regards to reference data inputs.

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05:30

Importing Reference Data into CLC Genomics Workbench

tv.qiagenbioinformatics.com ·

2023/10/18

Import reference data sets located on your hard drive into CLC Genomics Workbench.

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01:52:28

RNA-seq data analysis and interpretation using QIAGEN...

tv.qiagenbioinformatics.com ·

2023/10/18

This 120-minute training will teach you how to easily analyze and interpret RNA-seq data using QIAGEN CLC Genomics Workbench software and QIAGEN Ingenuity Pathway Analysis (IPA). For RNA-seq data, you will learn how to: • Import FASTQ files, cell matrix files and metadata and how to download references • Map reads to a reference genome and generate gene and transcript counts and QC reports displaying % mapped reads, knee plots, etc. • Generate visualizations of results, such as heatmaps,

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03:38

Modification of Custom Reference Data in CLC Genomics...

tv.qiagenbioinformatics.com ·

2023/10/17

Modifingcustomreferencedatasets with theReference Data Manager.

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01:24:07

Exploring pan-cancer immunomodulators for biomarker...

tv.qiagenbioinformatics.com ·

2023/10/12

Cancer outcome is influenced by both the tumor microenvironment and host immune response. Using QIAGEN OmicSoft Studio to access public data from The Cancer Genome Atlas (TCGA) and our human Single Cell Lands collection, you’ll learn how to: • View host immune response clusters across TCGA samples • Identify differentially expressed immunomodulators across sample groups • Visualize single-cell dimension reduction maps and overlay expression data • Identify potential biomarkers whose expression

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59:05

Scale up NGS bioinformatics analysis throughput with...

tv.qiagenbioinformatics.com ·

2023/10/11

Scale your NGS analysis to match your sequencing throughput using our QIAGEN CLC Genomics cloud solution. In this webinar, you’ll learn about the flexible and powerful setup for running your NGS sequence analyses on Amazon Web Services (AWS). You’ll learn how to use QIAGEN CLC Genomics Workbench to customize workflows and send analyses to AWS Batch for execution. Together we’ll also explore analysis automation solutions, third-party dockers, audit trails and user management, all of which are

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01:09:55

QIAGEN Biomedical Knowledge Base: Data- and...

tv.qiagenbioinformatics.com ·

2023/10/11

Biomedical relationships knowledge is now required for innovative data- and analytics-driven drug discovery. It powers biomedical knowledge graph analysis, artificial intelligence (AI)-driven target identification and many more applications. In this one-hour training, you’ll get an introduction to QIAGEN Biomedical Knowledge Base. You’ll learn how to tackle applications you can’t achieve with the QIAGEN Ingenuity Pathway Analysis (IPA) graphical user interface, or which can be done quicker and with

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01:05:36

Introduction to Phosphorylation Analyses in QIAGEN...

tv.qiagenbioinformatics.com ·

2023/10/05

In this training, we’ll introduce how you can analyze and interpret your phosphoproteomics data in QIAGEN IPA. Using an example phosphoproteomics dataset, we will answer questions such as: • How can I format the data before uploading it into QIAGEN IPA? • How do I set up the analysis? • Which upstream kinases are implicated in the observed phosphoproteomics changes? • What are the targets of a particular upstream kinase and how do their levels of phosphorylation change over time? • How do the levels

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55:27

Supercharge your AI in drug discovery with...

tv.qiagenbioinformatics.com ·

2023/10/03

If you’re working in pharma or biotech, you likely rely on artificial intelligence (AI) to help you identify new drug targets or plausible biomarkers for disease within large data sets. Yet AI alone isn’t enough. A large proportion of Biomedical data have errors and are unstructured. For AI models to provide reliable insights, the underlying data must be of ‘high quality’, meaning it’s accurate, comprehensive, up-to-date and standardized. Jesper Ryge (Idorsia Pharmaceuticals), Alex Jarasch (Neo4j)

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01:24:32

Cross-species comparison and validation for drug...

tv.qiagenbioinformatics.com ·

2023/09/27

Some human studies may be unfeasible or unethical, making cross-species research critical for drug discovery and biomarker validation. Cross-species research is a crucial method to collect data to examine potential toxicity for a candidate drug, determine the efficacious doses that may be suitable for humans, identify potential biomarkers for a disease of interest or a therapeutic response and understand the mechanisms of disease or treatment. While animal models and humans have similar anatomy and

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01:30:14

Analysis of exposure to perfluoroalkyl and...

tv.qiagenbioinformatics.com ·

2023/09/22

Environmental contamination of perfluoroalkyl and polyfluoroalkyl substances (PFAS) is of significant concern due to a wide range of adverse health effects induced by these chemicals, including hepatotoxicity. Analyzing next-generation sequencing data (NGS) from RNA-seq experiments to identify PFAS-induced adverse outcome pathways in the liver may help better understand the mechanisms of PFAS-induced hepatotoxicity. This training will use QIAGEN CLC Genomics Workbench to generate differential

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51:40

Analyzing QIAseq DNA Panels with QIAGEN CLC Genomics...

tv.qiagenbioinformatics.com ·

2023/09/21

This training will focus on analyzing QIAseq DNA panel datasets with QIAGEN CLC Genomics Workbench and the Biomedical Genomics Analysis plugin, including a live “FASTQ-to-VCF” demo of data import, data analysis and investigation. We will also show how to set up the analysis of a custom QIAseq DNA panel. During this training, you’ll learn about: • Import of FASTQ files • Launching an analysis workflow • Inspection of QC reports, genome browser view, detected variants and other workflow outputs •

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