PODCAST

tv.qiagenbioinformatics.com

Watch tutorials, interviews and much more on our web based TV channel!

science & medicine

All Episodes

24:12

Indication Expansion and Repurposing of PIK3CA Kinase...

tv.qiagenbioinformatics.com ·

2023/09/20

en-us

58:33

Integrating deeply curated omics data with APIs for...

tv.qiagenbioinformatics.com ·

2023/09/19

If you’re a data scientist or bioinformatician working in biopharma and need extensive high-quality ‘omics data for your projects in target discovery, this training is for you. You’ll learn how to programmatically discover, retrieve, filter, aggregate and analyze ‘omics data from our extensive repositories of deeply-curated multi-omics data. You’ll learn how to leverage extensive metadata to find and combine datasets of interest, find and test signatures and perform custom analyses to reveal

en-us

55:11

Introduction to QIAGEN CLC Genomics Workbench &...

tv.qiagenbioinformatics.com ·

2023/09/14

In this training, we will introduce you to QIAGEN CLC Genomics Workbench, including a live demo of the basic features and main functionalities. During the training, we’ll cover: • A general overview of the Workbench user interface • Easy installation on Windows, Mac and Linux • Plugin installation, e.g., Biomedical Genomics Analysis plugin • Reference Data Management • Working with reads from various NGS platforms • Running individual tools and workflows • Batch processing of data • Data

en-us

01:59:46

QIAGEN Ingenuity Pathway Analysis (IPA) for grant...

tv.qiagenbioinformatics.com ·

2023/09/14

QIAGEN Ingenuity Pathway Analysis (IPA) represents a robust resource to aid in the process of writing grants publications. Driven by a wealth of manually-curated molecular interactions and associations in the QIAGEN Knowledge Base together with pre-analyzed public ‘omics data for hundreds of thousands of samples from QIAGEN OmicSoft Lands, IPA provides biological insights regardless of whether you have your own data or not. In the absence of your own data, IPA provides a resource to query existing

en-us

01:33:04

Metagenomics and taxonomic profiling using amplicon...

tv.qiagenbioinformatics.com ·

2023/09/14

When it comes to taxonomic profiling of the microbiome, amplicon sequence variants (ASVs) is a method that has unique benefits compared to the traditional method of sequence similarity-based operational taxonomic unit (OTU) clustering. This training’ll cover how to effectively do taxonomic profiling using QIAGEN CLC Genomics Workbench’s ASV tools and a customizable workflow. Specifically, you’ll learn how to: 1. Collect and bin sequence variants for each sample 2. Merge AVS tables to compare

en-us

01:29:57

Drug treatment, toxicology and target safety...

tv.qiagenbioinformatics.com ·

2023/09/06

In this 90-minute training, you'll learn how to perform drug treatment, toxicology and target safety assessment-related discoveries using QIAGEN Ingenuity Pathway Analysis (IPA) and QIAGEN Omicsoft Lands. Using public data from GTEx (normal tissue), GEO, cancer collections and more, you'll learn how to use Omicsoft Lands to: • Investigate a drug target or biomarker expression across different normal tissues, disease conditions, treatments and more • Correlate the expression of two or more genes •

en-us

01:31:59

Compare and contextualize your results using QIAGEN...

tv.qiagenbioinformatics.com ·

2023/08/23

Take your QIAGEN Ingenuity Pathway Analysis (IPA) analyses to the next level by comparing them to your own analyses (different time points, treatments, cell lines, diseases and more) or to a library of over 100K precomputed datasets to find similar or opposite biological signatures. Identify key genes or entities and then explore how they are expressed across normal tissues, diseases and more from over 600K biological samples to gain deep context. In this training, you'll learn how to: • Get

en-us

01:31:02

Part I: Single-cell RNA sequencing data analysis...

tv.qiagenbioinformatics.com ·

2023/08/21

This two-part series will walk you through single-cell RNA sequencing (scRNA-seq) analysis starting with a matrix file or FASTQ files and ending with a deep understanding of key pathways, regulators and cell type signatures within your data. This session is for part I of this training. In this session, you'll learn to use QIAGEN CLC Genomics Workbench to perform secondary analysis on your scRNA-seq data. Specifically, you will learn how to: • Import your raw FASTQ or processed cell-matrix files •

en-us

01:31:19

Part II: Single-cell RNA sequencing data...

tv.qiagenbioinformatics.com ·

2023/08/21

This two-part series will walk you through single-cell RNA sequencing (scRNA-seq) analysis starting with a matrix file or FASTQ files and ending with a deep understanding of key pathways, regulators and cell type signatures within your data. In this session, we'll explore how you can take your scRNA-seq differential expression results produced from QIAGEN CLC Genomics Workbench (or from another software/package) and upload them into QIAGEN Ingenuity Pathway Analysis (IPA) to uncover a deep

en-us

01:26:32

Immune repertoire analysis using QIAGEN CLC Genomics...

tv.qiagenbioinformatics.com ·

2023/08/21

The composition of the immune repertoire, consisting of the T cell and B cell receptors (TCR and BCR), is important for an organism's adaptive immune system and plays a pivotal role in an individual's overall health. Understanding the complex array of TCR and BCR allows for developing precision medicine and immunotherapy. Analyzing next-generation sequencing (NGS) data from RNA-seq experiments to characterize and understand TCR and BCR clonotypes may aid in identifying cases that could benefit from

en-us

01:32:42

Interpreting genetic risk loci from GWAS in the...

tv.qiagenbioinformatics.com ·

2023/08/16

Genome-wide association studies (GWAS) provide insights into the genetic architecture of disease by identifying susceptibility loci for the disease within a population. If you'd like to identify disease genes and novel biological pathways that underlay the disease pathogenesis to identify novel drug targets, QIAGEN Ingenuity Pathway Analysis (IPA) helps you characterize and validate risk loci within a biological context. In this training, you'll discover how to perform a core analysis for a list of

en-us

01:38:10

Indication expansion and drug repurposing using...

tv.qiagenbioinformatics.com ·

2023/08/16

Research and development for new drugs and disease treatments can be lengthy and costly. Indication expansion can help broaden the impact of a new drug that has already been through the arduous R&D process for a disease or cancer. Drug repurposing can take this concept and expand on it by looking for other diseases with similar drug target biology. The logic is if they share similar target biology, they may benefit from the same treatment. During this training, we'll cover skills such as: • Querying

en-us

01:33:29

Metagenomics taxonomic profiling using QIAGEN CLC...

tv.qiagenbioinformatics.com ·

2023/07/28

QIAGEN CLC Microbial Genomics Module provides tools and workflows for many various bioinformatics applications, including microbiome analysis, isolate characterization, functional metagenomics and antimicrobial resistance characterization. The module supports the analysis of bacterial, viral and eukaryotic (fungal) genomes and metagenomes. This training focuses on amplicon-based taxonomic profiling (16S/18S/ITS sequencing OTU clustering). Specifically, we’ll cover together: • An overview of the

en-us

01:29:13

Delving into public single-cell RNA-seq data using...

tv.qiagenbioinformatics.com ·

2023/07/28

Single-cell RNA-sequencing (scRNA-seq) is widely used to study tissue heterogeneity, identify novel cell types, study pathogenic mechanisms, develop targeted therapies (including immunotherapy) and more. Accordingly, scientists have deposited a tremendous amount of scRNA-seq data into public domains like GEO. In this training, you will learn how to: · Locate public single-cell studies of interest to you using QIAGEN Omicsoft Single Cell Lands · Study different cell types by dimension reduction plots

en-us

01:24:00

Investigating genomic variants using QIAGEN CLC...

tv.qiagenbioinformatics.com ·

2023/07/21

Discovering new genes implicated in hereditary diseases or cancer progression is challenging yet advancing rapidly due to the increase in next-generation sequencing (NGS) cohort data. These data analyses produce insights into associations between gene variants and diseases and the biological mechanisms of these gene variants. By combining QIAGEN CLC Genomics Workbench, QCII-T and QIAGEN IPA, you can analyze sequencing data obtained from a variety of NGS technologies, annotate gene variants using the

en-us

01:39:48

Target exploration and cell line selection for drug...

tv.qiagenbioinformatics.com ·

2023/07/21

Cancer cell line models have been a cornerstone of cancer research for decades. Profiling cancer cell lines is a powerful tool to identify gene alterations or cancer-related pathways and to discover potential drug targets. This training will focus on using QIAGEN OmicSoft Lands and Ingenuity Pathway Analysis (IPA) as guides to select cell lines and translate insights gained from cell lines into discovering new possible drug targets. In this 90-minute training, we’ll explore how you can use our

en-us

01:19:48

Pathogen detection and variant analysis using hybrid...

tv.qiagenbioinformatics.com ·

2023/07/21

The detection and surveillance of pathogens such as respiratory viruses, sexually transmitted pathogens, adventitious agents and antimicrobial-resistant bacteria are increasingly important in healthcare settings and environmental monitoring. The COVID-19 pandemic highlighted the importance of identifying and differentiating variants of concern. By applying the lessons learned from the COVID-19 pandemic to other pathogens of interest, it’s clear there’s a widespread need for the ability to target

en-us

28:00

Insights into cancer genomics via COSMIC v98

tv.qiagenbioinformatics.com ·

2023/07/21

Our understanding of cancer mechanisms, genetics and complexities continues to expand rapidly. Without a streamlined, standardized and easy to understand organizational system to keep track of this plethora of knowledge, potentially crucial data can effectively be lost. Trusted by scientists for nearly 20 years, COSMIC is the world’s largest, most comprehensive, expert-curated resource for exploring the impact of somatic mutations in human cancers. Join this webinar with Leonie Hodges, Scientific

en-us

52:17

Scale your comprehensive genomic profiling workflow...

tv.qiagenbioinformatics.com ·

2023/06/28

Automating and scaling a comprehensive genomic profiling workflow can be a tedious and challenging process that requires lots of time and resources. However, an intelligent clinical decision support platform and on-demand expert support services can make all the difference. In this webinar, learn about QIAGEN Clinical Insight (QCI) Interpret for Oncology, a clinical decision support platform that has been trusted to analyze and interpret more than 3 million patient molecular profiles worldwide

en-us

01:31:30

De novo assembly, BLAST and genome finishing using...

tv.qiagenbioinformatics.com ·

2023/06/27

This webinar will introduce users to the tools available for short reads (Illumina) as well as long reads (Oxford Nanopore, Pac Bio) de novo assembly in CLC Genomics Workbench. It will also go over other useful functionalities such as BLAST and genome finishing. Participants will learn the following: o Download and install needed plugins. o Import data required for the analysis. o Run the de novo assembly workflow. o For long reads, improve a de novo assembly by polishing with short, high-quality

en-us

375 results

tv.qiagenbioinformatics.com

All Episodes

Similar Podcasts

科学史评话最新专辑

科学史评话

Hablando con Científicos - Cienciaes.com

cienciaes.com

天方烨谈

基因频道

The Permaculture Podcast

Scott Mann

汪诘：科学有故事（主打）

科学有故事