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tv.qiagenbioinformatics.com

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science & medicine

All Episodes

08:24

IPA data upload tutorial

tv.qiagenbioinformatics.com ·

2025/07/01

Presented by Lynne Mullen, Ph. D.

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06:40

IPA data formatting tutorial

tv.qiagenbioinformatics.com ·

2025/07/01

Presented by Lynne Mullen, Ph.D.

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40:48

Part III: Formatting and Uploading Your Data into IPA

tv.qiagenbioinformatics.com ·

2025/07/01

Learn how to format your own data and how to upload it into IPA. IPA can upload your experimental data to enable you to perform pathways visualization, literature searches on the molecules in the dataset, and enable you to perform the many different type of analyses offered in IPA. In this webinar we will use metastatic melanoma microarray data as an example dataset.Learn how to: • Format the incoming data to be analyzed by IPA • Upload the data for analysis • Explore your uploaded data • Start a

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39:29

Formatting and uploading your dataset into IPA

tv.qiagenbioinformatics.com ·

2025/07/01

Learn how to format your own data and how to upload it into IPA. IPA can upload your experimental data to enable you to perform pathways visualization, literature searches on the molecules in the dataset, and to perform the many different types of analyses offered in IPA. In this webinar we will use gene expression data as an example dataset.Interested in learning more? Click hereTimestamp placements and descriptions: 0:00-2:09 Introduction to the webinar 2:10-3:44 Example dataset used for the

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41:06

Part II: Formatting and Uploading your Data into IPA

tv.qiagenbioinformatics.com ·

2025/07/01

Learn how to format your own data and how to upload it into IPA. IPA can upload your experimental data to enable you to perform pathways visualization, literature searches on the molecules in the dataset, and to perform the many different types of analyses offered in IPA. In this webinar we will use phosphoproteomics data as an example dataset.Interested in learning more? Click here

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38:50

Interpreting your comparison analyses results in IPA

tv.qiagenbioinformatics.com ·

2025/06/30

Learn how to view and interpret your comparison analyses results in IPA and the multiple ways of relating the molecules in your dataset to the body of information in the Ingenuity Knowledge Base. IPA allows you to compare analysis results from multiple experimental groups to identify similarities, differences, and trends. Heatmaps for Canonical Pathways, Upstream Regulators, and Diseases & Functions allow you to easily and quickly view information from your analyses side-by-side. You can also

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40:50

Interpreting the Results of Your Phosphoproteomics...

tv.qiagenbioinformatics.com ·

2025/06/30

Learn how to view and interpret your Phosphoproteomics Analysis results in IPA. Find out how to understand your Phosphoproteomics Analysis and about the multiple ways of relating the molecules in your dataset to the body of information in the Ingenuity Knowledge Base.Interested in learning more? Click here

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01:57:30

New user training: QIAGEN Ingenuity Pathway Analysis...

tv.qiagenbioinformatics.com ·

2025/06/30

New user training: Large dataset analysis and knowledge base queries using QIAGEN Ingenuity Pathway Analysis (IPA)Users will learn how to: • Upload their dataset (RNA-seq, scRNA-seq, proteomics, metabolomics and more) and perform interactive core/pathway analysis in IPA • Understand the different result types produced (pathways, key regulators, impact on biological functions/diseases and more) • Compare different experimental conditions (treatments, timepoints, single-cell clusters, disease types

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18:37

Understanding the P-Value of Overlap Statistic in IPA

tv.qiagenbioinformatics.com ·

2025/06/27

Learn how to interpret your p-value of overlaps results in IPA. You can gain a deeper understanding of the right-tailed Fisher’s Exact Test, why it’s used in IPA, how the results are calculated, and caveats to keep in mind when interpreting your results.For more information visitour websiteSections:0:00-1:09 Introduction to the video. The two types of p-values that are relevant for IPA and how they differ.1:09-2:25 History of the Fisher’s Exact Test: the “Lady Tasting Tea” experiment.2:25-5:50

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01:00:18

Uncover molecular drivers of the tumor...

tv.qiagenbioinformatics.com ·

2025/06/27

Understanding the tumor microenvironment (TME) presents a major challenge for biopharma researchers and translational scientists. The complexity of cellular interactions, variability across patient samples, and overwhelming volume of public omics data can make it difficult to pinpoint key molecular drivers and predict functional consequences. Building a clear, actionable view of the TME often feels like assembling a puzzle without the picture on the box.In this webinar, discover how QIAGEN Ingenuity

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01:36:59

Multi-omics (metabolomics, proteomics,...

tv.qiagenbioinformatics.com ·

2025/06/27

This 90-minute training session is about how QIAGEN Ingenuity Pathway Analysis (IPA) allows visualization of molecular intricacy and variations at multiple levels such as transcriptome, proteome, and metabolome. Through a series of brief technical vignettes, it is demonstrated how to:· Generate associations among molecular signatures obtained via integrating multi-omics data· Extract mechanisms from multi-omics data for precision medicine· Disease stratification based on multi-omics profiles· Map

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55:45

From Variants to Vision: Driving Oncology...

tv.qiagenbioinformatics.com ·

2025/06/26

Aptly called "bench-to-bedside", translational research involves developing and testing new techniques and therapies for better disease management and patient care. This field plays a pivotal role in ensuring that discoveries realize their potential for real-world impact instead of staying confined to the lab.Join us in exploring how two tools can accelerate translational cancer research. Human Somatic Mutation Database (HSMD) Professional is an expert-curated somatic knowledgebase that incorporates

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01:30:17

ChIP-seq, Histone-seq and Methyl-seq analysis using...

tv.qiagenbioinformatics.com ·

2025/06/26

This training will focus on how a user can analyze their epigenomics data using QIAGEN CLC Genomics Workbench.Specifically, the trainer will cover how to• Import the raw sequencing data• Download or import reference, metadata and other needed files• Mapping reads to a reference genome• Calling and visualizing peaks• Export graphical and tabular resultsIn addition, per registrant feedback and the trainer discretion additional topics such as customizing the workflow, how to send data to Ingenuity

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01:27:23

De novo assembly, BLAST and genome finishing using...

tv.qiagenbioinformatics.com ·

2025/06/18

This webinar will introduce users to the tools available for short reads (Illumina) as well as long reads (Oxford Nanopore, Pac Bio) de novo assembly in CLC Genomics Workbench. It will also go over other useful functionalities such as BLAST and genome finishing.Participants will learn the following:o Download and install needed plugins.o Import data required for the analysis.o Run the de novo assembly workflow.o For long reads, improve a de novo assembly by polishing with short, high-quality reads.o

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01:06:44

QIAGEN IPA Summer Camp - Day 3

tv.qiagenbioinformatics.com ·

2025/06/13

Join us for three 60-minute training sessions for QIAGEN Ingenuity Pathway Analysis (IPA).In this training, you’ll learn how to:Monday June 9 – Session#1: 1pm ET/10am PT • IPA general overview • Upload your dataset (RNA-seq, scRNA-seq, proteomics, metabolomics and more) • Set up core/pathway analysis in IPATuesday June 10 – Session#2: 1pm ET/10am PT • Understand the different result types produced (pathways, key regulators, and more) • Customize chart outputs using filters and different chart types

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59:27

QIAGEN IPA Summer Camp - Day 2

tv.qiagenbioinformatics.com ·

2025/06/13

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35:44

One tool to predict adverse drug reactions – Meet...

tv.qiagenbioinformatics.com ·

2025/06/13

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01:03:16

QIAGEN IPA Summer Camp - Day 1

tv.qiagenbioinformatics.com ·

2025/06/12

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01:22:07

Checkpoint inhibitor and immuno-oncology...

tv.qiagenbioinformatics.com ·

2025/06/11

While there is great interest in the scientific community to investigate drug targets and biomarkers from public immune-oncology data, such investigation is hindered by the difficulty in finding and combining related datasets to perform large-scale meta-analyses. This webinar will focus on how high-quality curated genomic repositories such as QIAGEN OmicSoft Lands immediately allows in-depth investigations across diverse data sources (GEO, CPTAC, TCGA, GTEx and more) to discover and validate

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01:21:02

RNA-seq analysis for long reads

tv.qiagenbioinformatics.com ·

2025/06/10

This training will focus on how a user can analyze their long reads data using QIAGEN CLC Genomics Workbench.Specifically, the trainer will cover how to• Import the long reads data• Download or import reference, metadata and other needed files• Process such data and generate downstream RNA-seq outputs• Export high resolution graphics and tablesIn addition, per registrant feedback and trainer discretion additional topics such as customizing the workflow, how to send data to Ingenuity Pathway

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